Taxon	HAKU.02057.04	HAKU.04092.05	HAKU.04287.03	HAKU.06449.04	HAKU.06601.03	HAKU.07991.04	HAKU.12368.03	HAKU.14131.03	HAKU.14257.05	HAKU.14257.06	HAKU.15133.03	HAKU.15133.05	HAKU.17022.02	HAKU.17043.03	HAKU.17282.03	HAKU.19356.04	HAKU.22968.06	HAKU.23313.04	HAKU.24962.03
Treponema denticola (SP1)	0	10	0	6	0	15	0	0	5	6	12	9	27	3	0	0	92	3	0
Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP100)	0	0	0	0	0	0	0	0	5	4	0	0	66	0	0	0	0	0	0
Peptoanaerobacter [Eubacterium] yurii (SP101)	0	2	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	1
Veillonella sp._HMT_780 (SP106)	115	253	0	576	0	381	252	242	54	75	64	86	127	693	9	106	12	1333	365
Fusobacterium nucleatum_subsp._polymorphum (SP112)	1	4	0	11	0	29	14	25	0	1	0	3	0	2	4	1	0	12	0
Streptococcus sp._HMT_064 (SP12)	357	9	0	212	227	132	242	9	0	29	478	274	338	22	2	29	5	95	227
Lactobacillus taiwanensis (SP120)	292	52	0	64	9	3	0	0	4	7	3	32	9	17	45	0	0	18	7
Selenomonas noxia (SP129)	0	2	0	0	0	12	0	3	22	12	0	34	8	0	0	0	303	73	0
Gemella haemolysans (SP137)	0	6	0	0	0	2	0	0	0	0	40	45	34	0	0	0	0	4	0
Gemella sanguinis (SP139)	44	7	0	9	10	0	7	0	5	15	11	6	5	0	11	13	7	7	7
Streptococcus downii (SP14)	360	88	0	14	43	21	133	69	7	36	163	219	156	97	59	64	208	31	99
Leptotrichia hofstadii (SP140)	68	12	0	25	30	1	147	24	12	27	29	60	28	21	1	10	49	68	154
Lachnoanaerobaculum saburreum (SP153)	50	5	0	0	15	6	45	4	5	7	62	125	3	0	0	8	8	23	26
Rosenbergiella australiborealis (SP157)	0	6	0	26	0	19	0	4	0	0	9	15	0	0	0	0	0	18	0
Haemophilus paraphrohaemolyticus (SP189)	0	0	0	3	0	2	7	4	0	7	12	22	0	0	29	9	1	2	7
Streptococcus oralis_subsp._dentisani_clade_398 (SP19)	26	2	0	11	4	0	0	0	62	3	0	0	9	0	6	4	9	17	2
Haemophilus sputorum (SP190)	12	179	0	450	0	22	27	73	25	55	168	298	240	65	2	22	74	171	7
Alloprevotella tannerae (SP191)	20	43	0	97	13	18	13	59	80	13	23	27	12	62	0	5	1819	37	39
Leptotrichia sp._HMT_909 (SP192)	6	0	0	21	0	2	0	0	0	0	1	3	3	20	0	0	0	3	7
Aggregatibacter aphrophilus (SP195)	69	5	0	79	55	10	27	6	8	28	24	136	5	14	74	21	8	19	40
Aggregatibacter paraphrophilus (SP196)	171	16	0	83	9	1	2	29	9	7	30	15	12	8	0	3	1586	23	3
Lautropia mirabilis (SP197)	1143	2296	0	369	2094	1275	1168	1173	394	4166	472	300	405	219	1039	448	173	322	621
Streptococcus sp._HMT_061 (SP20)	1606	92	0	3156	1028	281	954	47	180	583	1394	709	357	73	6	308	155	780	1087
Bacillus paramobilis (SP220)	0	146	0	0	25	0	13	0	12	1	26	6	74	3	0	0	0	6	3
Bacillus paranthracis (SP221)	1	37	0	36	0	21	6	20	6	2	28	75	6	0	1	0	71	50	5
Bacillus mycoides (SP224)	169	24	0	19	64	12	28	23	38	62	20	34	6	7	135	38	89	46	9
Bacillus gaemokensis (SP225)	54	2	0	6	1	9	3	2	0	0	18	27	2	6	0	5	1	0	20
Mogibacterium vescum (SP23)	1	11	0	33	1	0	0	0	28	2	9	15	9	1	0	0	87	18	0
Mogibacterium neglectum (SP24)	6	4	0	10	1	2	12	0	1	5	7	23	1	0	9	0	0	4	9
Alloprevotella sp._HMT_473 (SP248)	34	934	0	291	0	900	221	977	47	60	8	273	79	1448	6	2	3	1088	822
Mogibacterium diversum (SP26)	171	2050	0	81	34	296	172	431	6	33	141	59	481	453	982	383	8	121	256
Prevotella salivae (SP263)	204	309	0	0	57	375	7	185	49	67	19	121	66	12	370	75	66	195	17
Porphyromonas sp._HMT_930 (SP266)	39	57	0	698	3	508	286	1261	8	1026	168	81	32	889	246	322	0	279	416
Prevotella histicola (SP27)	249	2989	0	26	30	678	17	686	9	20	24	20	259	199	1259	777	88	115	24
Escherichia fergusonii (SP272)	0	28	0	22	0	47	0	0	20	28	2	12	38	15	0	0	0	3	0
Escherichia marmotae (SP273)	0	0	0	8	0	0	0	1	0	0	0	0	9	0	0	0	0	0	3
Shigella sonnei (SP276)	0	3	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
Porphyromonas gingivalis (SP277)	0	0	0	0	0	6	0	0	0	0	8	0	384	7	0	0	0	3	0
Veillonellaceae_[G-1] bacterium_HMT_155 (SP278)	28	1	0	0	1	0	0	0	0	1	0	0	0	1	0	0	26	1	0
Leptotrichia sp._HMT_215 (SP28)	173	208	0	5	13	9	8	76	0	1	142	317	197	229	27	27	0	10	127
Prevotella sp._HMT_309 (SP29)	6	88	0	10	0	41	0	36	0	4	0	1	4	3	39	26	4	1	0
Knoellia remsis (SP296)	9	0	0	0	13	1	0	6	0	5	14	19	2	4	3	1	4	3	6
Prevotella denticola (SP297)	40	3	0	0	11	0	0	14	44	10	0	53	34	33	0	6	5443	21	11
Prevotella sp._HMT_942 (SP298)	14	37	0	48	1	14	0	206	0	3	1	0	2	108	4	0	0	24	41
Rothia aeria (SP300)	18	27	0	42	525	71	35	3	20	56	50	94	29	110	63	48	27	432	78
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP301)	7	0	0	32	1	67	19	0	0	3	6	12	7	0	10	4	0	2	13
Veillonella tobetsuensis (SP303)	22	23	0	21	3	42	7	6	4	6	39	33	32	7	13	7	6	10	21
Veillonella rogosae (SP304)	57	80	0	58	92	11	12	36	18	58	37	63	35	43	32	60	1557	103	43
Schaalia lingnae (SP315)	2	39	0	0	0	147	0	1	0	0	12	4	18	10	10	17	0	0	2
Lachnospiraceae_[G-8] bacterium_HMT_500 (SP316)	0	5	0	0	1	0	0	0	0	0	5	4	24	1	0	0	8	0	0
Veillonella atypica (SP318)	4	3	0	23	46	0	4	1	0	6	0	7	6	3	92	11	19	6	2
Streptobacillus felis (SP320)	0	0	0	40	0	0	0	0	0	0	0	0	257	1	0	0	0	0	0
Prevotella nanceiensis (SP322)	17	139	0	27	26	31	35	60	0	3	15	3	97	15	47	119	0	17	36
Riemerella sp._HMT_322 (SP323)	11	11	0	10	12	10	134	31	2	9	12	46	32	19	145	5	0	9	103
Streptococcus sp._HMT_056 (SP324)	51	106	0	10	303	28	415	91	144	44	95	580	38	59	46	145	376	277	53
Streptococcus himalayensis (SP325)	10	10	0	78	7	1	8	8	7	6	10	6	5	2	45	6	21	3	11
Prevotella sp._HMT_313 (SP333)	27	11	0	10	9	1	0	3	15	2	6	5	5	13	14	7	225	2	4
Mycoplasma faucium (SP334)	0	44	0	7	0	10	0	0	12	2	4	14	36	2	0	0	0	6	0
Neisseria oralis (SP336)	290	117	0	1635	141	91	121	155	140	1613	632	173	107	94	433	183	495	155	1776
Actinomyces johnsonii (SP339)	94	25	0	35	98	4	8	12	12	29	16	35	5	11	43	14	53	59	28
Prevotella sp._HMT_526 (SP341)	669	13	0	12	96	3	50	32	172	8	41	217	15	22	10	17	69	146	37
Peptostreptococcaceae_[XI][G-7] bacterium_HMT_081 (SP342)	438	442	0	42	37	249	0	49	74	6	11	21	28	51	32	49	0	190	92
Staphylococcus caprae (SP351)	35	3	0	19	0	56	2	0	2	0	41	78	71	10	11	3	0	10	5
Staphylococcus aureus (SP353)	9	3	0	0	11	1	0	2	158	8	5	41	2	0	0	872	10	28	0
Staphylococcus petrasii (SP354)	336	1545	0	181	52	23	240	387	0	5	643	94	1082	652	311	255	10	27	596
Staphylococcus simiae (SP358)	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0
Staphylococcus saccharolyticus (SP359)	5	0	0	0	0	0	1	15	0	0	2	0	9	1	38	1	0	0	2
Staphylococcus warneri (SP361)	50	13	0	68	68	2	25	17	63	10	36	57	22	0	21	4	103	105	0
Capnocytophaga sputigena (SP37)	0	0	0	5	0	0	0	0	20	1	16	23	19	2	0	0	71	17	0
Alloprevotella sp._HMT_308 (SP38)	14	177	0	8	13	40	4	39	0	5	3	4	2	20	188	14	3	4	2
Streptococcus lactarius (SP380)	603	1255	0	1165	539	912	551	43	79	536	1336	567	1534	2878	343	4771	39	328	1852
Brevibacterium celere (SP384)	0	39	0	0	0	1	3	0	0	0	27	57	10	16	0	0	0	11	1
Brevibacterium iodinum (SP385)	4857	298	0	120	19	169	0	172	95	7	3	37	17	585	21	106	3	282	53
Brevibacterium ammoniilyticum (SP388)	15	4	0	0	10	0	0	0	2	0	7	2	0	1	1	0	107	0	0
Bifidobacterium dentium (SP397)	7	8	0	23	59	7	50	1	2	38	31	76	4	1	23	32	1	11	58
Bifidobacterium moukalabense (SP398)	1156	59	0	68	112	23	124	20	50	92	26	301	29	169	49	74	74	244	832
Neisseria sp._HMT_018 (SP399)	0	0	0	0	0	0	3	0	0	26	11	4	0	0	0	2	23	0	1
Veillonellaceae_[G-1] bacterium_HMT_148 (SP40)	0	9	0	9	0	2	0	0	1	2	13	51	52	13	1	0	0	0	0
Capnocytophaga sp._HMT_332 (SP400)	1	1	0	8	12	3	27	3	2	9	3	22	1	3	7	3	0	2	24
Peptoanaerobacter stomatis (SP402)	1	0	0	0	0	5	0	0	0	0	17	19	9	6	0	0	0	0	0
Porphyromonas sp._HMT_285 (SP411)	0	57	0	0	0	0	0	0	0	0	16	23	49	0	0	0	0	14	0
Kocuria assamensis (SP430)	33	10	0	23	37	5	23	8	3	38	31	729	6	4	63	8	11	12	32
Selenomonas noxia (SP431)	5	10	0	18	27	14	38	17	29	57	8	40	1	1	5	1	203	12	67
Granulicatella adiacens (SP432)	352	1065	0	221	163	972	854	52	19	77	672	716	921	283	164	211	41	282	483
Prevotella multisaccharivorax (SP433)	0	0	0	0	0	0	0	0	2	5	0	18	0	0	0	0	2742	0	0
Acinetobacter junii (SP440)	13	0	0	0	9	0	0	1	15	0	0	0	1	59	0	1	2934	0	2
Acinetobacter guillouiae (SP441)	86	34	0	4	5	4	7	8	0	0	3	4	12	3	31	3	0	2	11
Acinetobacter gyllenbergii (SP444)	5	2	0	18	0	96	0	5	7	0	4	127	0	5	0	0	0	0	2
Acinetobacter vivianii (SP445)	20	15	0	0	0	0	2	16	18	7	2	0	1	11	0	0	40	0	5
Acinetobacter proteolyticus (SP448)	17	43	0	7	127	27	186	5	8	28	9	234	17	19	12	10	14	71	10
Lancefieldella parvula (SP455)	33	102	0	27	4	263	0	30	4	1	18	19	31	21	46	29	3	64	13
Capnocytophaga sp._HMT_324 (SP459)	17	70	0	10	0	55	3	25	15	0	6	13	8	8	4	2	0	39	9
Treponema sp._HMT_251 (SP46)	35	30	0	35	127	18	146	26	5	46	38	153	28	14	108	45	1	11	72
Treponema sp._HMT_250 (SP47)	94	79	0	38	112	18	42	12	262	121	10	266	10	26	56	73	53	22	77
Lancefieldella rimae (SP483)	47	13	0	0	1	0	3	0	0	1	10	20	0	5	14	1	8	18	6
Peptidiphaga gingivicola (SP485)	8	42	0	26	55	1	3	0	289	9	16	4	2	3	0	28	1	82	5
Prevotella maculosa (SP496)	178	16	0	6	27	6	10	8	5	16	15	10	2	4	2	11	16	27	6
Prevotella sp._HMT_317 (SP497)	88	6	0	14	55	10	13	35	1	53	10	43	22	15	16	10	11	21	53
Prevotella shahii (SP498)	14	0	0	8	0	2	0	0	0	2	4	2	10	6	0	0	2	0	5
Haemophilus parainfluenzae (SP499)	1238	4245	0	839	1403	268	2769	1510	5	1329	2691	1106	4282	1101	5903	1208	264	512	3344
Lactobacillus salivarius (SP50)	0	9	0	0	0	14	0	0	7	2	42	188	65	0	0	3	17	192	0
Prevotella pallens (SP500)	67	223	0	19	35	250	8	70	0	5	8	54	108	25	152	42	0	117	16
Capnocytophaga sp._HMT_864 (SP502)	0	53	0	0	0	3	13	0	4	4	0	0	1	4	16	12	0	0	0
Veillonellaceae_[G-1] bacterium_HMT_132 (SP507)	14	0	0	2	1	3	0	105	0	0	33	0	92	1	0	3	0	6	39
Prevotella sp._HMT_472 (SP509)	16	0	0	3	55	0	17	1	1	4	0	0	24	1	5	0	0	0	0
Oribacterium sinus (SP510)	50	400	0	38	20	12	51	61	0	3	45	45	13	8	35	17	3	23	113
Peptostreptococcaceae_[G-4] bacterium_HMT_369 (SP511)	0	0	0	0	0	0	0	0	0	0	13	11	3	0	0	0	0	0	0
Leptotrichia sp._HMT_392 (SP512)	42	2	0	5	23	12	41	6	0	1	28	63	12	6	1	6	1	9	76
Streptococcus downei (SP514)	16	18	0	0	2	17	0	1	8	3	13	5	28	11	5	99	1	6	45
Streptococcus dentirousetti (SP515)	149	526	0	1608	172	2117	2680	2297	344	730	813	721	1906	2210	102	1446	229	2299	1776
Limosilactobacillus mucosae (SP518)	0	0	0	0	7	0	1	0	0	1	0	6	0	0	0	0	553	0	0
Streptococcus macedonicus (SP519)	75	488	0	11	111	3	63	60	63	48	5	9	4	12	51	6	4914	19	3
Veillonella sp._HMT_917 (SP522)	0	134	0	0	0	99	3	4	5	6	1	1	1	36	264	85	3	12	0
Prevotella multiformis (SP523)	0	186	0	0	0	0	0	0	0	5	5	70	92	13	0	8	1	0	0
Enterococcus saccharolyticus (SP526)	1	3	0	9	0	0	7	0	0	0	9	2	117	1	0	0	0	61	1
Enterococcus gallinarum (SP527)	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
Capnocytophaga sp._HMT_901 (SP53)	0	7	0	0	0	0	6	0	0	1	7	6	18	1	0	0	3	0	1
Priestia flexa (SP538)	0	95	0	0	0	31	0	17	0	0	0	0	0	1	26	10	0	0	0
Priestia qingshengii (SP540)	47	1	0	0	14	1	0	2	1	4	4	5	2	3	7	2	3	5	11
Aggregatibacter actinomycetemcomitans (SP542)	9	245	0	747	0	23	0	0	45	95	85	143	31	9	0	0	0	0	0
Selenomonas sp._HMT_136 (SP547)	22	0	0	0	5	0	4	6	1	1	0	11	0	1	0	0	1	0	0
Prevotella fusca (SP551)	5	2	0	0	8	84	0	0	5	1	9	6	7	3	0	0	9	0	0
Stomatobaculum longum (SP558)	60	410	0	7	42	248	17	55	7	1	21	176	7	48	23	19	128	86	2
Corynebacterium xerosis (SP559)	41	463	0	62	1153	58	294	22	271	89	413	240	189	122	16	70	167	1509	49
Leptotrichia sp._HMT_417 (SP56)	4124	185	0	102	46	558	70	529	225	36	64	360	102	870	49	122	37	1646	207
Peptostreptococcaceae_[G-6] [Eubacterium]_nodatum (SP561)	0	1	0	0	0	0	0	0	0	0	11	0	51	1	0	0	0	0	0
Pseudomonas cremoricolorata (SP568)	110	256	0	18	32	119	44	32	1	6	32	104	35	40	39	28	125	87	9
Pseudomonas putida (SP569)	44	2	0	26	4	23	131	26	0	5	39	49	41	11	59	6	3	9	185
Pseudomonas straminea (SP570)	25	2	0	23	0	0	0	0	2	0	12	1	2	4	0	1	31	10	2
Pseudomonas cuatrocienegasensis (SP573)	4	5	0	44	0	213	0	3	17	1	29	1	12	36	483	506	294	2	195
Ruminococcaceae_[G-1] bacterium_HMT_075 (SP577)	134	1	0	38	56	8	68	25	5	15	7	12	28	24	4	1	26	17	31
Treponema maltophilum (SP578)	7	3	0	0	0	0	0	0	0	11	0	11	3	2	0	5	0	0	5
Butyrivibrio sp._HMT_455 (SP585)	0	14	0	0	0	7	0	5	0	0	0	0	0	0	0	5	0	1	0
Megasphaera micronuciformis (SP603)	86	601	0	4	6	314	3	78	12	1	24	8	22	17	109	24	6	25	0
Enterobacter bugandensis (SP608)	0	0	0	11	0	14	0	0	0	0	1	3	0	0	0	0	0	0	48
Kluyvera intermedia (SP625)	9	28	0	48	11	0	0	8	71	16	9	5	17	2	2	17	159	46	0
Leptotrichia buccalis (SP63)	96	0	0	0	12	22	29	33	8	9	24	38	32	28	2	11	8	37	116
Fretibacterium sp._HMT_360 (SP635)	0	2	0	5	0	0	0	0	0	0	0	9	5	0	0	0	0	3	0
Peptidiphaga sp._HMT_183 (SP636)	8	27	0	2	130	1	0	1	20	1	15	23	5	0	0	119	0	7	0
Leptotrichia goodfellowii (SP657)	473	488	0	286	5	199	26	646	78	32	23	252	138	623	105	149	28	134	34
Dialister propionicifaciens (SP658)	82	47	0	0	12	1	11	12	13	5	0	0	2	3	0	0	7	3	0
Klebsiella grimontii (SP667)	861	111	0	156	155	34	668	95	121	170	63	204	160	165	112	571	105	198	55
Arthrobacter livingstonensis (SP669)	1	167	0	39	11	319	0	103	0	3	11	3	28	10	1	47	384	17	6
Arthrobacter oryzae (SP688)	0	23	0	17	0	37	0	0	4	3	19	57	62	7	0	0	0	3	0
Lancefieldella rimae (SP690)	21	5	0	28	5	0	13	13	17	1	5	23	2	3	0	1	43	45	7
Pluralibacter gergoviae (SP692)	1	0	0	25	0	54	0	0	4	7	0	0	0	1	4	0	0	0	0
Citrobacter sedlakii (SP693)	0	25	0	24	0	19	0	0	3	0	7	64	7	3	0	0	536	12	3
Ruminococcaceae_[G-2] bacterium_HMT_085 (SP701)	10	355	0	12	1	156	0	17	9	3	7	4	9	13	0	2	11	29	5
Corynebacterium matruchotii (SP712)	1198	61	0	39	115	31	41	4	128	132	243	3452	58	38	1	81	15	284	129
Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP731)	10	25	0	56	2	1	1	1	0	2	36	81	12	2	0	3	0	54	0
Ottowia sp._HMT_894 (SP732)	0	0	0	27	0	0	0	0	0	0	1	4	0	0	0	4	0	0	0
Kocuria flava (SP734)	0	2	0	9	0	0	0	0	0	0	1	3	2	1	0	0	5	5	0
Treponema sp._HMT_256 (SP752)	0	1	0	3	0	0	0	0	2	0	0	2	7	4	0	0	1	0	0
Porphyromonas catoniae (SP753)	0	0	0	0	0	0	0	0	0	3	0	0	4	2	0	0	0	0	0
Actinomyces graevenitzii (SP760)	9	142	0	5	0	863	2	0	0	0	26	41	73	86	43	38	0	21	4
Catonella sp._HMT_164 (SP77)	0	3	0	7	0	0	0	0	0	0	3	5	7	0	0	0	0	0	0
Leptotrichia sp._HMT_225 (SP776)	255	94	1	97	0	20	10	21	0	22	90	35	68	39	4	3	69	26	164
Fusobacterium sp._HMT_248 (SP78)	11	34	0	0	0	38	5	3	0	11	0	5	89	17	2	0	0	25	84
Brevibacterium oceani (SP780)	0	27	0	0	0	0	0	0	3	4	4	16	23	0	0	8	0	0	0
Morococcus cerebrosus (SP787)	0	0	0	12	0	41	0	0	0	0	4	11	0	6	0	0	4	0	0
Neisseria flava (SP788)	17	17	0	33	29	17	39	1	7	8	20	41	4	10	49	13	0	3	8
Neisseria mucosa (SP789)	3	0	0	2	0	0	0	0	6	0	1	0	0	0	0	0	211	5	0
Leptotrichia sp._HMT_498 (SP79)	3084	41	0	19	70	3	84	68	51	56	35	93	16	79	3	25	22	228	465
Micrococcus endophyticus (SP801)	12	18	0	11	21	6	18	10	15	2	50	59	4	20	0	64	8	51	9
Micrococcus antarcticus (SP803)	0	311	0	181	1	3	6	5	0	263	0	101	59	42	1	0	444	0	67
Micrococcus yunnanensis (SP805)	3	91	0	0	0	0	0	73	0	3	6	1	1	0	316	0	0	0	4
Campylobacter concisus (SP811)	128	145	0	8	31	45	109	76	5	64	15	106	32	26	201	44	18	32	52
Oribacterium parvum (SP812)	1	4	0	4	0	9	0	23	0	0	6	0	5	2	2	0	0	0	6
Oribacterium sp._HMT_078 (SP823)	6	11	0	5	5	0	4	1	12	1	13	12	1	1	6	0	92	14	0
Bacteroidetes_[G-5] bacterium_HMT_507 (SP827)	0	8	0	0	0	0	0	0	1	0	1	64	6	8	0	0	0	0	0
Schaalia sp._HMT_172 (SP845)	53	400	0	15	0	303	0	14	0	0	47	30	106	76	21	30	0	14	17
Kingella sp._HMT_459 (SP85)	8	16	0	58	2	12	0	3	0	18	17	8	0	1	13	7	9	4	67
Leuconostoc holzapfelii (SP871)	23	63	0	19	0	78	3	13	0	0	11	12	32	13	12	3	137	25	7
Pseudoramibacter alactolyticus (SP875)	0	0	0	0	0	0	0	0	5	0	0	0	3	0	0	1	24	0	0
Selenomonas artemidis (SP88)	0	7	0	3	0	2	0	0	3	0	0	0	3	0	0	0	0	4	0
Treponema lecithinolyticum (SP90)	0	2	0	19	0	0	0	0	4	1	3	11	1	1	0	0	64	22	0
Streptococcus parasanguinis_clade_411 (SP91)	0	30	0	12	0	8	0	0	13	7	15	11	62	17	1	0	90	0	0
Streptococcus parasanguinis (SP93)	2	36	0	3	53	23	41	3	12	70	90	108	8	13	83	23	8	53	7
Streptococcus sp._HMT_057 (SP94)	5	7	0	23	85	17	22	4	8	59	83	207	10	11	22	37	3	35	48
Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP1)	3	3	0	25	1	1	0	0	0	6	8	19	0	0	65	4	26	3	16
Fusobacterium nucleatum_subsp._animalis_simiae (SPP10)	108	4	0	7	9	11	0	19	2	11	31	33	10	5	0	16	458	28	14
Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP105)	139	196	0	64	1372	32	255	169	9	349	430	557	573	77	76	114	62	70	132
Atopobium_Lancefieldella rimae (SPP106)	12	5	0	22	4	0	0	13	17	1	5	15	1	1	0	1	42	45	6
Prevotella shahii_sp._HMT_317 (SPP107)	188	8	0	1	19	2	19	2	0	14	1	7	4	13	0	15	37	0	27
Lactobacillus_Streptococcus constellatus_salivarius (SPP109)	3	3	0	41	8	16	0	13	28	1	76	91	55	13	0	3	14	36	5
Fusobacterium_Streptococcus downii_nucleatum_subsp._animalis (SPP11)	386	121	0	185	105	29	41	75	16	23	98	111	35	49	4	74	2779	124	46
Streptococcus dentirousetti_downei_sobrinus (SPP111)	40	2	0	0	13	0	1	0	16	3	0	3	2	0	0	73	3	0	11
Streptococcus downei_porcinus_salivarius_thermophilus_uberis_ves ...(6 species) (SPP112)	122	114	0	10	17	139	2	9	42	51	83	94	239	131	0	811	0	52	432
Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 (SPP118)	49	25	0	10	9	28	0	14	32	4	2	28	2	8	53	15	42	9	1
Fusobacterium hwasookii_sp._HMT_370 (SPP119)	585	22	0	23	32	409	19	152	5	20	165	253	113	71	14	26	24	17	383
Lachnoanaerobaculum gingivalis_umeaense (SPP121)	95	20	0	18	8	2	69	27	0	3	63	81	46	28	8	10	3	16	87
Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP13)	610	537	0	3543	929	2046	1772	1369	267	545	4130	5068	4994	2592	219	5101	130	2718	4937
Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP131)	580	236	0	99	262	321	381	35	52	121	1091	858	650	196	2	411	97	721	429
Leptotrichia buccalis_sp._HMT_225 (SPP132)	72	0	0	17	2	0	0	14	2	4	2	19	19	16	4	5	7	8	47
Kingella_Neisseria denitrificans_elongata (SPP133)	101	42	0	61	10	6	263	8	1	187	228	872	34	19	80	90	28	15	72
Campylobacter rectus_showae (SPP141)	28	43	0	24	22	19	10	0	12	19	20	112	93	18	1	8	39	2	37
Porphyromonas pasteri_sp._HMT_278 (SPP147)	199	135	0	33	58	47	792	168	1	51	135	194	978	109	41	183	13	17	439
Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP148)	16	128	0	26	0	370	113	15	3	42	8	6	40	24	9	463	3	253	94
Neisseria_Streptococcus canis_sp._HMT_057 (SPP149)	12	7	0	0	23	12	32	0	2	6	13	23	4	1	0	0	0	0	5
Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP150)	33	274	0	1106	509	1811	629	2253	105	3090	380	871	755	1468	337	487	31	432	801
Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP151)	1	31	0	14	8	1	58	3	0	11	3	1	9	3	68	25	0	8	132
Selenomonas sp._HMT_442_sputigena (SPP152)	216	20	0	4	2	9	8	7	32	1	17	81	19	28	3	8	37	110	25
Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP153)	12	3	0	0	2	0	45	4	0	18	5	5	5	6	0	3	5	7	7
Hallella_Prevotella dentalis_seregens (SPP155)	0	1	0	0	0	0	0	0	2	2	1	5	18	3	0	0	0	1	0
Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP156)	3056	252	0	1406	588	345	6855	1445	62	4628	3425	3655	711	150	4313	495	313	1323	2300
Streptococcus salivarius_thermophilus_vestibularis (SPP159)	651	804	0	670	416	4024	29	32	790	103	267	334	743	432	1	2780	6	773	1532
Kingella sp._HMT_459_sp._HMT_932 (SPP165)	6	1	0	28	0	0	3	0	0	0	0	4	2	2	5	3	17	4	19
Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP170)	282	1030	0	332	309	3526	104	26	43	58	1046	136	876	393	3	614	9	181	505
Streptococcus parasanguinis_sp._HMT_057 (SPP171)	27	0	0	0	0	0	4	1	0	19	40	93	1	0	3	10	0	0	8
Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP22)	1010	222	0	139	144	236	34	89	156	375	1358	1267	996	522	2	1645	84	534	1059
Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP25)	73	19	0	1	8	7	3	8	6	10	25	45	0	24	1	9	21	47	13
Haemophilus_Pseudomonas cuatrocienegasensis_paraphrohaemolyticus_sputorum (SPP26)	7	78	0	265	10	33	0	147	0	152	41	6	150	129	139	54	11	0	653
Aggregatibacter aphrophilus_paraphrophilus (SPP27)	1	0	0	54	0	25	0	0	2	161	16	0	65	8	178	34	0	5	23
Aggregatibacter_Selenomonas_Treponema aphrophilus_maltophilum_noxia (SPP28)	165	3	0	0	1	1	8	0	0	1	3	14	0	0	2	1	6	10	0
Lautropia dentalis_mirabilis (SPP29)	70	8	0	139	1	120	8	14	54	1537	86	37	46	1	2376	19	79	67	213
Fusobacterium_Haemophilus_Streptococcus canifelinum_downii_naviforme_nucleatum_subsp._poly ...(6 species) (SPP3)	124	71	0	0	13	6	0	6	1	9	39	61	36	27	19	11	4	6	47
Prevotella sp._HMT_306_vespertina (SPP31)	250	621	0	38	4	1050	0	186	29	15	10	22	101	98	1497	111	33	361	5
Lautropia_Prevotella histicola_mirabilis_scopos_sp._HMT_306_sp._HMT_313 ...(7 species) (SPP32)	28	56	0	0	0	5	0	21	0	1	2	4	21	41	61	42	1	6	0
Bacillus_Parvimonas_Peptostreptococcus Candidatus massiliensis_paranthracis_sp._HMT_110_s ...(4 species) (SPP34)	2	0	0	12	0	0	1	1	4	0	44	18	23	9	1	0	0	21	39
Mogibacterium diversum_neglectum_pumilum_vescum (SPP35)	16	19	0	11	3	67	0	3	1	0	11	21	20	10	5	11	15	55	7
Neisseria cinerea_flavescens_perflava_subflava (SPP36)	618	1058	0	4702	46	140	764	65	1	422	2523	1594	2384	3883	491	656	116	31	2042
Treponema maltophilum_sp._HMT_260 (SPP37)	0	1	0	0	0	0	0	0	4	2	0	3	2	0	0	0	0	0	0
Fusobacterium_Streptococcus canifelinum_downii_nucleatum_subsp._polymorphum_sp ...(4 species) (SPP4)	566	76	0	47	156	23	165	75	5	210	197	491	52	126	46	89	30	74	374
Mogibacterium_Prevotella diversum_histicola (SPP41)	40	264	0	0	0	7	0	48	0	5	9	11	40	62	148	82	5	6	9
Lautropia_Mogibacterium_Prevotella diversum_histicola_mirabilis_scopos_sp._HMT_313_sp ...(6 species) (SPP42)	114	41	0	0	6	1	1	92	1	6	15	22	94	12	5	84	3	40	42
Mogibacterium_Prevotella diversum_scopos_sp._HMT_314 (SPP44)	1264	123	0	6	364	7	183	464	25	42	174	239	562	93	9	991	18	829	157
Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP45)	5	13	0	13	3	5	14	14	5	10	16	11	11	6	7	4	9	6	7
Alloprevotella_Escherichia_Treponema coli_medium_sp._HMT_230_sp._HMT_913 (SPP46)	5	21	0	0	5	7	1	0	0	0	4	7	5	0	0	0	0	3	1
Escherichia_Treponema coli_medium (SPP47)	5	21	0	3	0	1	0	0	4	2	16	3	4	1	2	0	16	0	1
Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP5)	3428	7956	0	10046	7636	7510	12245	13171	2346	8102	7677	10059	11673	6628	44	8301	2393	13160	11128
Leptotrichia_Pseudomonas putida_sp._HMT_215 (SPP51)	5	0	0	0	0	0	0	0	0	0	0	6	10	1	0	0	0	0	4
Veillonella parvula_rogosae_tobetsuensis (SPP57)	252	84	0	58	77	23	120	140	18	57	82	43	106	140	213	187	138	52	332
Lautropia_Prevotella mirabilis_scopos_sp._HMT_313_sp._HMT_314 (SPP59)	45	47	0	6	1	7	14	67	0	8	10	4	26	77	16	11	1	2	2
Fusobacterium_Streptococcus downii_nucleatum_subsp._nucleatum_sp._HMT_203 (SPP6)	91	2	0	0	19	2	27	5	2	26	23	49	13	17	1	13	91	87	41
Lautropia_Prevotella mirabilis_sp._HMT_313 (SPP60)	369	695	0	25	0	1195	0	876	3	4	20	8	82	69	290	70	24	101	4
Tannerella sp._HMT_286_sp._HMT_808 (SPP61)	152	14	0	12	46	7	15	45	1	12	53	102	17	12	12	3	15	27	46
Leptotrichia_Veillonella atypica_goodfellowii (SPP62)	4	3	0	23	46	0	4	1	0	6	0	7	6	3	92	11	19	6	2
Klebsiella_Veillonella atypica_grimontii (SPP63)	937	4588	0	213	222	1460	296	749	72	106	170	212	313	778	1709	581	80	696	76
Alloprevotella_Treponema sp._HMT_250_sp._HMT_913 (SPP64)	12	16	0	0	44	10	17	1	0	4	1	10	0	5	0	0	17	0	4
Prevotella scopos_sp._HMT_314 (SPP65)	59	78	0	20	1	0	0	32	14	33	63	14	88	69	1	105	0	18	0
Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 (SPP66)	0	6	0	0	0	0	0	0	0	0	2	4	5	0	0	0	0	0	0
Prevotella_Staphylococcus sp._HMT_313_warneri (SPP67)	130	55	0	0	5	18	0	35	0	4	15	13	51	29	80	61	3	21	0
Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP68)	207	33	0	17	128	1	0	3	106	28	43	85	1	4	3	22	11	36	4
Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP69)	290	290	0	86	280	85	168	3	268	79	211	656	47	44	51	89	17	486	165
Fusobacterium_Haemophilus_Streptococcus downii_naviforme_sputorum (SPP7)	163	163	0	197	228	22	79	20	41	100	61	251	12	27	4	45	95	116	32
Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] bacterium_HMT_081_stomatis (SPP71)	0	10	0	0	0	0	0	0	3	0	12	0	1	0	0	1	0	7	1
Bacteroidaceae_[G-1]_Staphylococcus bacterium_HMT_272_simiae (SPP75)	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0
Peptococcus sp._HMT_167_sp._HMT_168 (SPP77)	43	15	0	11	0	2	0	0	2	2	3	4	9	1	0	0	31	0	2
Streptococcus lactarius_peroris_sp._HMT_074 (SPP79)	12	10	0	2	5	1	0	3	1	10	38	23	23	41	0	43	0	5	28
Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) (SPP80)	204	158	0	7	28	120	7	19	6	86	748	344	513	161	0	292	11	91	266
Bifidobacterium dentium_moukalabense (SPP83)	1	0	0	0	0	0	0	0	0	0	0	95	0	0	0	0	2886	37	0
Porphyromonas endodontalis_sp._HMT_285 (SPP88)	0	12	0	10	0	1	0	0	2	12	73	419	347	14	1	0	0	67	1
Prevotella loescheii_sp._HMT_472 (SPP89)	68	10	0	19	0	10	1	3	2	12	11	23	1	2	7	5	1	1	55
Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP91)	1	0	0	21	2	35	2	53	0	37	26	1	437	163	13	38	0	5	336
Schaalia odontolytica_odontolyticus_sp._HMT_180 (SPP92)	41	899	0	8	14	159	7	1	2	1	40	102	42	26	4	21	1	30	23
Kocuria assamensis_palustris (SPP93)	2	1	0	7	2	1	0	0	12	660	0	1	0	0	0	29	0	1	2
Acinetobacter_Catonella guillouiae_sp._HMT_164 (SPP96)	7	10	0	1	1	0	2	1	6	0	26	36	15	1	7	1	4	7	2
Acinetobacter_Prevotella sp._HMT_292_sp._HMT_293_vivianii (SPP97)	60	15	0	3	19	0	0	4	2	8	0	0	0	9	0	4	227	18	1
Atopobium_Lancefieldella parvula_parvulum (SPP98)	33	102	0	27	4	263	0	30	4	1	18	19	31	21	46	29	3	64	13
